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M/s. Excel Engineering Enterprises v. Union of India & Ors. (W.P. No. 13932 of 2021 - Madras High Court)

High Court Rules in Favor of Taxpayer: A Major Relief on GST Input Tax Credit (ITC) Claims

By Yogesh Verma (CS/LLB) / 2 min read / GST Case Law

Introduction

In a significant ruling, the Madras High Court provided relief to M/s. Excel Engineering Enterprises by allowing their Input Tax Credit (ITC) claim, which was earlier denied by the GST department due to filing delays. The case highlights the impact of retrospective amendments to the Goods and Services Tax (GST) law and sets a precedent for businesses facing similar issues.

The judgment is particularly relevant to taxpayers who faced operational and financial difficulties in the initial years of GST implementation, especially during the COVID-19 pandemic. The ruling reinforces the principle that taxpayers should not be penalized unfairly for procedural delays when legislative amendments offer relief.

Case Details

Case Title: M/s. Excel Engineering Enterprises v. Union of India & Ors.
Case Number: W.P. No. 13932 of 2021
Court: High Court of Judicature at Madras
Date of Order: 14th February 2025
Presiding Judge: Hon’ble Mr. Justice Krishnan Ramasamy
Petitioner: M/s. Excel Engineering Enterprises
Respondents:

1.     Union of India, Ministry of Finance, Department of Revenue

2.     Central Board of Indirect Taxes and Customs (CBIC)

3.     Commissioner of Commercial Taxes, Chennai

4.     Under Secretary, CBIC

5.     Appellate Deputy Commissioner (GST), Trichy & Vellore Division

6.     State Tax Officer (Intelligence), Vellore

Background of the Case

Understanding Input Tax Credit (ITC) and Its Importance

Under the GST system, businesses can claim ITC on taxes paid for the purchase of goods and services, thereby reducing their overall tax liability. However, this benefit is subject to compliance with statutory deadlines. If a business fails to file its returns within the prescribed timeframe, it risks losing the ITC, leading to increased tax payments.

Events Leading to the Dispute

M/s. Excel Engineering Enterprises, a registered taxpayer under the GST regime, failed to file its GSTR-3B returns on time due to financial difficulties and other operational constraints. Consequently, the tax authorities denied their ITC claims under Section 16(4) of the CGST Act, 2017, which specifies the deadline for availing ITC.

As a result, the GST department issued a show cause notice and subsequently passed an order reversing the ITC claim and imposing tax, penalty, and interest. The petitioner challenged this order before the High Court, arguing that the denial of ITC was unjust and contrary to recent legislative changes that extended the ITC claim period.

Legal Arguments Presented in Court

Petitioner’s Contentions

1.     Delay Due to Exceptional Circumstances: The petitioner argued that the delay in filing returns was not deliberate but was caused by financial difficulties and disruptions due to the COVID-19 pandemic.

2.     Retrospective Amendment to GST Law: The Finance Act (No.2) of 2024 introduced Section 16(5) of the CGST Act, which extended the deadline for ITC claims for financial years 2017-18 to 2020-21 to November 30, 2021.

3.     Wrongful Denial of ITC: Since the petitioner had filed its GSTR-3B before the newly extended deadline, its ITC claim should have been allowed under the amended law.

4.     Unfair Taxation: The petitioner contended that denying ITC led to double taxation—once at the supplier’s end and again at the recipient’s end—contrary to the principles of fair taxation.

Respondents’ Arguments

1.     Strict Compliance with Deadlines: The tax authorities argued that Section 16(4) imposed a clear deadline for availing ITC and that failure to comply with this deadline resulted in automatic forfeiture of credit.

2.     No Automatic Application of Amendments: The department maintained that the amendment extending ITC claim deadlines should not automatically apply to all cases and should be assessed on a case-by-case basis.

3.     Risk of Fraudulent Claims: The authorities expressed concerns that extending ITC claim deadlines could encourage fake or excess claims.

Findings and Judgment of the High Court

Recognition of Retrospective Amendment

The High Court acknowledged that the Finance Act (No.2) of 2024 introduced an amendment to Section 16 of the CGST Act, allowing ITC claims for past financial years up to November 30, 2021. This amendment was given retrospective effect, meaning it applied to ITC claims for earlier years as well.

Quashing of the Tax Department’s Order

The court ruled that the tax department wrongfully denied ITC to the petitioner without considering the retrospective amendment. Consequently, the impugned order was quashed, and the authorities were directed to reverse their decision.

Relief Granted to the Petitioner

1.     Restoration of ITC Claim: The court held that the petitioner’s ITC claim was valid and should be allowed as per the amended law.

2.     Protection from Further Action: The tax authorities were restrained from taking any further action against the petitioner based on the reversed ITC claim.

3.     De-freezing of Bank Accounts: Since the impugned order led to the freezing of the petitioner’s bank account, the High Court ordered the authorities to de-freeze it immediately.

4.     Refund of Collected Tax: If any tax had already been collected from the petitioner under the impugned order, it was to be refunded or adjusted against future tax liabilities.

Clarification on Other ITC Disputes

The court clarified that if there were any other allegations, such as fake or excess ITC claims, the tax authorities could pursue separate investigations in accordance with the law. However, the current case strictly related to the issue of ITC denial due to delayed filing and was resolved in favor of the petitioner.

Significance of the Judgment

Recognition of Legislative Intent

The ruling reinforced the legislative intent behind the Finance Act (No.2) of 2024, which aimed to provide relief to taxpayers by extending ITC claim deadlines for past financial years. The court emphasized that retrospective amendments must be implemented fairly and should not be ignored by tax authorities.

Precedent for ITC Disputes

The judgment sets a precedent for other businesses facing similar ITC denial issues. Taxpayers who filed their GSTR-3B returns within the extended deadline may now cite this ruling to support their claims.

Relief for Businesses Affected by the Pandemic

The decision acknowledges the difficulties faced by businesses during the COVID-19 pandemic and ensures that taxpayers are not unfairly penalized for procedural delays caused by exceptional circumstances.

Strengthening of Taxpayer Rights

The ruling strengthens taxpayer rights under the GST regime by affirming that tax laws should be applied in a manner consistent with fairness and equity. It also discourages arbitrary actions by tax authorities that may lead to unjust financial burdens on businesses.

Conclusion

The Madras High Court’s ruling in M/s. Excel Engineering Enterprises v. Union of India & Ors. is a landmark decision in GST litigation. It not only provides relief to businesses but also strengthens the principle of fair taxation. By allowing ITC claims based on retrospective amendments, the court has ensured that genuine taxpayers are not unfairly penalized for procedural delays.

This judgment will serve as an important precedent for future disputes over ITC claims and emphasizes the need for a more taxpayer-friendly approach in GST administration. Businesses should take note of this ruling and ensure compliance with the latest GST laws to avoid similar disputes in the future.

Disclaimer: All the Information is based on the notification, circular and order issued by the Govt. authority and judgement delivered by the court or the authority information is strictly for educational purposes and on the basis of our best understanding of laws & not binding on anyone.

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